I am using version 3.042.033 and know for a fact that there is no problem in that version here.
Backlash settings that were used:
- 50% of max speed
- 0.005 Shuttle Acceleration
- Debounce interval 500
Can you post your xml file?
Do you have any break out boards, using the PP, etc?
You may want to try a slower percent, Shuttle Acceleration of say .010 of even .05 so you can watch the backlash get implemented at a snails pace.
Testing my memory as i don't use BC anymore......

RICH