Hi,
So I tied into my emergency stop circuit and with a connection to the cutter and another to a 0.0015” feeler gauge.
That is no the correct way. When your machine Estops it attempts to stop instantly and it will lose steps and therefore lose
its 'reference' or 'home'.
There is a Gcode instruction especially for 'probing' called G31. for example:
G31 Z-1 F10
It is assumed that the tip of the tool is say 1/4 inch (approx.) above the feeler gauge/touch plate. The Z axis will descend
towards Z=-1 inch at 10 inches per minute UNTIL it detects a probe strike event on Machs Probe input, at which point it will
use max deceleration to stop. At that point you can use the Z axis DRO to set your Z offset.
Craig