Hi, again. I'll try rearranging the wires but I would like to find some suitable 4 conductor shielded cable to use...
I too am suspecting that the error is occurring at the turnaround point, either when the direction signal is changing, or when the currents to the motors change in their sequence...
Acceleration values are affecting the result, but not in a linear fashion. Too high or too low and the errors get larger?

This is strange.
I'm not aware of any back EMF issues with steppers either but with 6 billion people and thousands of possible configurations of these machines in the world, why is it me that has the weird one?
As per my original posts describing the problem, The only differences are that the Y axis moves – and the X axis moves + when it gets these offset errors. The direction in which the program starts off ( which quadrant it goes into) seems to determine which axis/axes will drift. When they drift, it is always the same direction.
The X and Y axes have exactly the same motors and drive components. 1200 oz.in. Motors, 1:2 timing belts, 5TPI Rockford Ballscrews. The cross slid and table are exactly the same as Tiawanese Bridgeport copies. 9” by 42” table with the same saddle used on the knee mills.
I don't have the knowledge or equipment to test the signal qualities... I would probably smoke the parallel port, knowing my luck...
For information on stepper motor electrical characteristics search
www.geckodrive.com for an article called Step Motor Basics. It is VERY informative.
I'll be going to the Oregon GEARS model exhibition in Portland Saturday, but I hope to get some re cabling done soon.
Thanks for all the help. Don