I will do more tests to see if things change with "Charge Pump ON in Estop" enabled.
OK, I can't easily test this. The way my controller box is set up, the charge pump signal directly enables the BOB(built-in detector circuit), and also closes a contact on the external CNC4PC C4 Charge Pump Sensor. When closed, this contact, along with the 2 hardwired Estop switches, will allow 5VDC into the ESTOP pin on the BOB.
I have separate momentary pushbutton switches which allow me to get out of the "bootstrap loop" of having the Charge Pump off while the Estop input is low, but needing the Charge Pump signal in order to get the Estop to go high.
Checking "Charge Pump Active during Estop" just means the machine cycles in and out of a reset condition.
So what I really want to know, is why does pressing the onscreen RESET buttom before I press my hardwired reset pushbutton let the SS continue to function, while if I just press the hardware reset button(applying 5VDC to the Estop input on the BOB), the SS will stop communication?