Ahhh I see,
Unfortunately I suspect you will be unable to set the Machine Axis Co-ordinates to anything, except 0 when referencing to Home.
The machine co-ordinates are absolute and physical.
If you could change them to another figure ( even an offset of themselves ), the controller would be unable to tell where the machine axes were and would happily crash at speed through the home positions.
I actually tried changing the values through MachMad and whilst you can see it change, it is immediately returned to its original value.
regards
Melee