Hi Bill - with earlier tests I ran (before I tried Ian's suggestion) I found that leaving "Set Stop CV on Angle >" unchecked I didn't run as smooth as I did with it checked. Do you have a rotary axis? My problem only happens when I run with the A Rotary axis involved.
If I run the exact same toolpaths in x, Y, z instead of x, A, z they run without the clunking problem. (The clunking isn't coming from A (I triple checked).)
It really seems like Mach goes crazy with the acceleration on those G00 moves when doing rotary work. Ian's suggestion of the dwell before the G00 move seemed to keep Mach from overaccelerating on the following G00 move. I've looked all over for an option somewhere that might address this, but I just can't find anything.
Ed