Bit curious, your steps per unit seem quite course, how are the axis driven, presume a rack of some sort as you have for example the X axis at 2035 steps per inch and your motors will be 2000 steps per rev so your axis must move almost 1 inch per motor rev
In the SS config I would reduce the Step Frequency to 32KHz for all axis, this probably wont make any difference but you never know. Reason to reduce is with your steps per unit and velocity in motor tuning the fastest axis (Y axis) is only requiring 12KHz.
Hood