did you replace the ss usb cable?
Yes, but it did not help. I have read posts elsewhere about USB cables which are too "thin" to carry adequate load. I don't think that was my problem, I am using a separately powered break-out board and the Smooth Stepper has just one port in use at the moment.
I have same problem on z axes... limit switch trips as soon as i jog.
Hmm. I am not sure it is the same problem but it could be similar. Mine originated outside the system. While initiating a jog might be causing the limit to trip because of noise associated with the stepper motor it could also be something within the control circuits. If you are using a SmoothStepper, does setting a filter delay on the home or limit line in the SS setup have any effect? It has overcome my tripping although, obviously, it has not removed the cause of the interference. In my case a setting of 200 was enough to do the job.